User:Daniel Mietchen/Talks/Wikimania 2012/National Center for Biotechnology Information/Notes

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How can non-written knowledge be cited? A video approach: Oral citations. Other topics Research Newsletter, by Research Committee PMID parsing: PMID 19494429 is turned into PMID 19494429 Mess with licenses; search by license "Wikimedia as a Global Center for Biotechnology Information" Wikigenes PLoS Computational Biology's Topic Pages phylogenetic taxonomies based on NCBI data HubMed vs RecentChanges feed (see also WikiStream) Federated wiki (newest videos) Wikimedia statistics Oral citations Research related to NIH: Mietchen, D.; Dahnke, R.; Gaser, C. (2010). "Optimizing automated preprocessing streams for brain morphometric comparisons across multiple primate species". Nature Precedings. doi:10.1038/npre.2010.4511.1. List of publications Videos October 2013 update Topics discussed With action items "Share" button for images or media or papers "Cite on Wikipedia" button - also some discussion here Traffic stats from Wikimedia platforms suggestions are being collected here some Wikipedia-related Linkout data has been compiled here Wikipedia as a use case scenario for NCBI services example: OAMI bot what kind of functionality should NCBI provide in order to facilitate the work at Wikimedia projects? suggestions are also being collected here JATS-Con giving an updated version of this talk there Large-scale digitization efforts and associated markup contact Jeffrey Reznick Discuss with PubChem group about the possibility of their participating in Wikidata. Testing the waters Investigate ways to feedback markup fixes that resulted from OAMI back into the PMC corpus. Could OAMI team provide a "patch", in the software development sense, that would include a diff of every change to every XML file that they would want fixed? Or, perhaps a set of patches, one for license metadata, one for media types, and one for keywords? NIH Public Access Policy contact Neil Thakur Wikidata & curation of info in infoboxes - working with PubChem folks on this. Without action items Implementing NISO-OAMI at NCBI wiki companion Mirroring suitably licensed articles on GitHub/ Gitorious, allowing pull requests "Share" button for images or media or papers "This file is used in 5 Wikipedia articles" functionality Automated submission to NCBI resources like GenBank Interoperability of taxonomic information across NCBI resources JATS issues licensing media types keywords