RTRAF

RTRAF
Identifiers
Aliases	RTRAF, CGI99, CLE, CLE7, LCRP369, RLLM1, CGI-99, C14orf166, hCLE1, chromosome 14 open reading frame 166, RNA transcription, translation and transport factor, hCLE
External IDs	OMIM: 610858 MGI: 1915295 HomoloGene: 9355 GeneCards: RTRAF
Gene location (Human) Chr. Chromosome 14 (human) Band 14q22.1 Start 51,989,514 bp End 52,010,694 bp
Gene location (Mouse) Chr. Chromosome 14 (mouse) Band 14|14 A3 Start 19,861,419 bp End 19,873,892 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in secondary oocyte ganglionic eminence Achilles tendon palpebral conjunctiva right ventricle body of pancreas tibia left ventricle body of stomach sperm Top expressed in fossa condyle medial ganglionic eminence trigeminal ganglion primitive streak renal corpuscle medullary collecting duct vas deferens internal carotid artery endocardial cushion More reference expression data BioGPS More reference expression data
Gene ontology Molecular function RNA polymerase II complex binding identical protein binding RNA binding protein binding Cellular component cytoskeleton cytosol nucleus tRNA-splicing ligase complex cytoplasm microtubule organizing center nucleoplasm centrosome perinuclear region of cytoplasm mitotic spindle Biological process RNA transport regulation of transcription, DNA-templated positive regulation of transcription by RNA polymerase II transcription, DNA-templated viral process tRNA splicing, via endonucleolytic cleavage and ligation negative regulation of protein kinase activity Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 51637 68045 Ensembl ENSG00000087302 ENSMUSG00000021807 UniProt Q9Y224 Q9CQE8 RefSeq (mRNA) NM_016039 NM_026528 RefSeq (protein) NP_057123 NP_080804 Location (UCSC) Chr 14: 51.99 – 52.01 Mb Chr 14: 19.86 – 19.87 Mb PubMed search
Wikidata
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RNA transcription, translation and transport factor is a protein that in humans is encoded by the RTRAF gene.

Further reading

• Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
• Andersen JS, Lam YW, Leung AK, et al. (2005). "Nucleolar proteome dynamics". Nature. 433 (7021): 77–83. Bibcode:2005Natur.433...77A. doi:10.1038/nature03207. PMID 15635413. S2CID 4344740.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Howng SL, Hsu HC, Cheng TS, et al. (2004). "A novel ninein-interaction protein, CGI-99, blocks ninein phosphorylation by GSK3beta and is highly expressed in brain tumors". FEBS Lett. 566 (1–3): 162–8. doi:10.1016/j.febslet.2004.04.024. PMID 15147888.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Huarte M, Sanz-Ezquerro JJ, Roncal F, et al. (2001). "PA subunit from influenza virus polymerase complex interacts with a cellular protein with homology to a family of transcriptional activators". J. Virol. 75 (18): 8597–604. doi:10.1128/JVI.75.18.8597-8604.2001. PMC 115105. PMID 11507205.
• Dawson SJ, White LA (1992). "Treatment of Haemophilus aphrophilus endocarditis with ciprofloxacin". J. Infect. 24 (3): 317–20. doi:10.1016/S0163-4453(05)80037-4. PMID 1602151.