Azurin

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Azurin
Azurin tetramer, Pseudomonas aeruginosa
Identifiers
SymbolCopper-bind
PfamPF00127
SCOP25azu / SCOPe / SUPFAM
CDDcd13922
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Azurin is a small, periplasmic, bacterial blue copper protein found in Pseudomonas, Bordetella, or Alcaligenes bacteria. Azurin moderates single-electron transfer between enzymes associated with the cytochrome chain by undergoing oxidation-reduction between Cu(I) and Cu(II). Each monomer of an azurin tetramer has a molecular weight of approximately 14kDa, contains a single copper atom, is intensively blue, and has a fluorescence emission band centered at 308 nm.

Azurins and pseudoazurins participate in the denitrification processes in bacteria.,[1] including the gram-negative bacteria Pseudomonas aeruginosa, by interacting with cytochrome c551. Azurin from P aeruginosa is a type I blue copper protein (cupredoxin), while cytochrome c551 (9 kDa) is a haem-containing cytochrome. Azurin possesses a relatively large hydrophobic patch close to the active site, and two residues in this hydrophobic patch, Met-44 and Met-64, are believed to be involved in its interaction with the redox partners cytochrome c551 and nitrite reductase.[2]

Although unrelated to its electron-transfer property, azurin has been found to have anticancer properties through its interaction with tumor-suppressor protein p53.

Protein function

In its oxidized form, azurin (Cu2+Az) receives an electron from its redox partner and is reduced according to the following reaction:

Cu2+Az + e− → Cu+Az

The redox potential is 310 mV.[3]

The highly-interconnected beta-sheet structure of azurin is strongly coupled with its electron-transfer center (the copper-binding side).[4] Considerable experimental evidence exists to suggest that hydrogen bonds play a role in the long-distance electron transfer mechanism of azurin. Taken together, these observations suggest that electrons tunnel through the protein along its polypeptide and hydrogen bonds, making azurin a useful model system for studying long-range, intraprotein electron transfer (LRET).[4]

Protein structure

A Pymol rendering of the copper binding domain of 3fqy showing a copper atom surrounded by four associating ligands.
The copper binding domain of azurin rendered in PyMol, with four of the five copper-binding ligands labeled. The distance (in angstroms) from the copper atom to each individual ligand has been recorded.

Azurin is a monomeric protein that weighs approximately 14 kDa and is composed of 128 amino acids forming eight beta-strands arranged in a beta-barrel formation.[5] The strands are connected by turns and a single alpha-helical insertion.[5] A single-atom copper binding site is located about 7 Å below each monomer’s surface towards its northern end; the copper atom that inhabits it is coordinated by five ligands surrounded by an extensive hydrophobic patch.[6]

The three equatorial copper ligands are composed of a thiolate (Cys112) and two imidazoles (His46, His117), and the carbonyl oxygen atoms of Gly45 and Met121 serve as the two weak axial ligands.[5] With the exception of Gly45, the copper-binding configuration above is common to the structures of all blue type 1 copper-binding proteins determined thus far.[7] Once coordinated, the ligand-metal complex assumes a distorted, trigonal bi-pyramidal geometry that stabilizes the cuprous (Cu(I)) reduced state of the protein relative to the cupric (Cu(II)) oxidized state.[5] Structurally imposed backbonding between the copper d orbitals and its ligand p orbitals may further stabilize the cuprous state.[8]

Existing structural information about azurin has largely been derived from X-ray crystallography studies of single-site mutated forms of the protein. Notable structural features elucidated by crystallography include the beta-sandwich motif formed from eight interlocking beta strands,[5] as well as an alpha-helical segment outside the barrel linking beta-sheets 4 and 5.[5]

Although the Cu(I)/Cu(II) redox potential is typically higher for azurin than most other copper complexes, structural studies in which Met121 (one of azurin’s equatorial copper-coordinating ligands) is replaced have demonstrated that the absence of a thiolate copper ligand does not preclude high reduction potentials, as large hydrophobic residues in position 121 also raise the redox potential of the copper atom.[8] Thus, the higher redox potentials have been attributed to the exclusion of water from the metal-binding site, a condition augmented by the presence of bulky hydrophobic residues.[8]

Conversely, negatively charged residues lower the redox potential, since they stabilize the more positively charged cupric form of the copper ion.[8]

Biological function

When expressed in nitrogen-fixing organisms, azurin serves as the electron donor to nitrite reductase, an enzyme in the denitrification pathway of the nitrogen cycle.[9]

Azurins support oxidative deamination of primary amines by passing electrons from aromatic amine dehydrogenase to cytochrome oxidase, as well as from some c-type cytochromes to nitrite reductases.[10]

Disease relevance

Azurin has garnered significant attention as a potential therapeutic for various diseases, including cancer.[11] In vivo, it has been demonstrated to induce regression of human melanoma and breast cancer tissue with minimal toxic effects to the organism.[11]

Azurin enters preferentially into cancer cells via the p28 domain of the enzyme, which roughly corresponds to the extended alpha-helical region of the enzyme.[11] In cancer cells, azurin complexes with p53, stabilizing it and preventing association with E3 ubiquitin ligases, which would otherwise bind and mark the protein for destruction.[12] Four azurin molecules bind each p53 monomer with high affinity.[12] The p53/azurin complex travels to the nucleus, where p53 upregulates the transcription of proapoptotic genes Bax and Noxa.[12] P53 also activates the expression of cell-cycle inhibitors, preventing tumor cells from progressing beyond the G1 or S phase.[12] Although this pathway plays a significant role in azurin’s anticancer activity, the details of the interaction between azurin and p53 are not well understood.

A phase I clinical trial in the United States demonstrated both partial and complete tumor regression effects in fifteen stage IV cancer patients treated with the p28 amino-acid fragment of azurin.[13] Another phase I trial with the p28 fragment demonstrated azurin’s therapeutic effects against pediatric patients with brain tumors; subsequently, the USFDA approved the designation of p28 as an orphan drug for glioma.[14]

Azurin’s other domains may also exhibit strong anticancer activity by binding to cell surface receptor tyrosine kinases such as EphB2 receptors, which induce angiogenesis in cancer cells.[14] This is another mechanism by which azurin has been proposed to exhibit its therapeutic effects.

See also

References

  1. ^ De Rienzo F, Gabdoulline RR, Menziani MC, Wade RC (August 2000). "Blue copper proteins: a comparative analysis of their molecular interaction properties". Protein Science. 9 (8): 1439–54. doi:10.1110/ps.9.8.1439. PMC 2144732. PMID 10975566.
  2. ^ Yamada T, Goto M, Punj V, Zaborina O, Kimbara K, Das Gupta TK, Chakrabarty AM (December 2002). "The bacterial redox protein azurin induces apoptosis in J774 macrophages through complex formation and stabilization of the tumor suppressor protein p53". Infection and Immunity. 70 (12): 7054–62. doi:10.1128/IAI.70.12.7054-7062.2002. PMC 133031. PMID 12438386.
  3. ^ van den Bosch M, Swart M, Snijders JG, Berendsen HJ, Mark AE, Oostenbrink C, van Gunsteren WF, Canters GW (April 2005). "Calculation of the redox potential of the protein azurin and some mutants". ChemBioChem. 6 (4): 738–46. doi:10.1002/cbic.200400244. PMID 15747387. S2CID 7672576.
  4. ^ a b Arcangeli C, Bizzarri AR, Cannistraro S (April 1999). "Long-term molecular dynamics simulation of copper azurin: structure, dynamics and functionality". Biophysical Chemistry. 78 (3): 247–57. doi:10.1016/S0301-4622(99)00029-0. PMID 17030312.
  5. ^ a b c d e f Inoue T, Nishio N, Suzuki S, Kataoka K, Kohzuma T, Kai Y (June 1999). "Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine". The Journal of Biological Chemistry. 274 (25): 17845–52. doi:10.1074/jbc.274.25.17845. PMID 10364229.
  6. ^ van de Kamp M, Silvestrini MC, Brunori M, Van Beeumen J, Hali FC, Canters GW (November 1990). "Involvement of the hydrophobic patch of azurin in the electron-transfer reactions with cytochrome C551 and nitrite reductase". European Journal of Biochemistry. 194 (1): 109–18. doi:10.1111/j.1432-1033.1990.tb19434.x. PMID 2174771.
  7. ^ Opella SJ, DeSilva TM, Veglia G (April 2002). "Structural biology of metal-binding sequences". Current Opinion in Chemical Biology. 6 (2): 217–23. doi:10.1016/S1367-5931(02)00314-9. PMID 12039007.
  8. ^ a b c d McLaughlin MP, Retegan M, Bill E, Payne TM, Shafaat HS, Peña S, Sudhamsu J, Ensign AA, Crane BR, Neese F, Holland PL (December 2012). "Azurin as a protein scaffold for a low-coordinate nonheme iron site with a small-molecule binding pocket". Journal of the American Chemical Society. 134 (48): 19746–57. doi:10.1021/ja308346b. PMC 3515693. PMID 23167247.
  9. ^ Vijgenboom E, Busch JE, Canters GW (September 1997). "In vivo studies disprove an obligatory role of azurin in denitrification in Pseudomonas aeruginosa and show that azu expression is under control of rpoS and ANR". Microbiology. 143 (9): 2853–63. doi:10.1099/00221287-143-9-2853. hdl:1887/3239420. PMID 9308169.
  10. ^ Dodd FE, Hasnain SS, Hunter WN, Abraham ZH, Debenham M, Kanzler H, Eldridge M, Eady RR, Ambler RP, Smith BE (August 1995). "Evidence for two distinct azurins in Alcaligenes xylosoxidans (NCIMB 11015): potential electron donors to nitrite reductase". Biochemistry. 34 (32): 10180–6. doi:10.1021/bi00032a011. PMID 7640272.
  11. ^ a b c Bernardes N, Ribeiro AS, Seruca R, Paredes J, Fialho AM (March 2011). "Bacterial protein azurin as a new candidate drug to treat untreatable breast cancers". 1st Portuguese Biomedical Engineering Meeting. pp. 1–4. doi:10.1109/ENBENG.2011.6026047. ISBN 978-1-4577-0522-9. S2CID 23396316.
  12. ^ a b c d Gao M, Zhou J, Su Z, Huang Y (December 2017). "Bacterial cupredoxin azurin hijacks cellular signaling networks: Protein-protein interactions and cancer therapy". Protein Science. 26 (12): 2334–2341. doi:10.1002/pro.3310. PMC 5699490. PMID 28960574.
  13. ^ Warso MA, Richards JM, Mehta D, Christov K, Schaeffer C, Rae Bressler L, Yamada T, Majumdar D, Kennedy SA, Beattie CW, Das Gupta TK (March 2013). "A first-in-class, first-in-human, phase I trial of p28, a non-HDM2-mediated peptide inhibitor of p53 ubiquitination in patients with advanced solid tumours". British Journal of Cancer. 108 (5): 1061–70. doi:10.1038/bjc.2013.74. PMC 3619084. PMID 23449360.
  14. ^ a b Chaudhari A, Mahfouz M, Fialho AM, Yamada T, Granja AT, Zhu Y, Hashimoto W, Schlarb-Ridley B, Cho W, Das Gupta TK, Chakrabarty AM (February 2007). "Cupredoxin-cancer interrelationship: azurin binding with EphB2, interference in EphB2 tyrosine phosphorylation, and inhibition of cancer growth". Biochemistry. 46 (7): 1799–810. doi:10.1021/bi061661x. PMID 17249693.
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